CDS

Accession Number TCMCG010C13286
gbkey CDS
Protein Id XP_016565782.1
Location complement(join(232368353..232368646,232369121..232369209,232369505..232369598,232377362..232377534,232377623..232377770))
Gene LOC107864040
GeneID 107864040
Organism Capsicum annuum

Protein

Length 265aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016710296.1
Definition PREDICTED: U1 small nuclear ribonucleoprotein A [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
KEGG_TC -
KEGG_Module M00351        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K11091        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005685        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0017069        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0030619        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035613        [VIEW IN EMBL-EBI]
GO:0035614        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGAGGCGAACCAAAATACAAACCCGAACCCGAACCCGAACCCGAACCCGAACCCGACTCCGAGCCCAACTCCGAACCCCGGCGAAGTTCCACCAAATGTGACTATTTACATCAACAACCTCAATGAAAAAATCAAGCTAGAAGAGTTGAAGAAATCACTGCACGCTGTGTTCTCACAGTTTGGCAAGATACTGGAGGTTTTAGCATTCAAAACCCTAAAGCATAAAGGACAAGCGTGGGTAGTGTTTGAGGAAGTTTCTTCTGCTAGCAATGCACTTCGACAGATGCAGGGTTTTCCTTTCTACGATAAACCTATGAGAATACAATATGCAAAGACGAAATCTGATGTTGTAGCAAAAGCTGATGGCACTTTTGTTCCCAGAGAAAAAAGAAAGAGGCAAGATGATAAAGGGAGAAAGAAAAAGGACCAGCAAGATGCTAATCAAACTGGAATGGGTCTGAATCCTGCGTATGCTGGTGCTTATGGTGCAGCACCACCTTTCTCACAGATGCCATACATGGGTGGAGCTAAAGCTGCAGTACCCGAGGCTCCTGCTCCTCCAAATAGCATACTCTTTGTGCAGAATCTACCTCATCAGTCTACTCCAATGATGCTTCAAATGCTCTTCTGCCAATATCCAGGCTTCAAGGAAGTTAGGATGGTTGAAGCAAAGCCAGGAATTGCTTTCATAGAATATGGAGATGAGATGCAATCAACTGTTGCTATGCAAGCACTGCAAGGATTCAAAATTACCGCCGACAATCCCATGTTAATCACTTATGCAAAGAAATAG
Protein:  
MEEANQNTNPNPNPNPNPNPTPSPTPNPGEVPPNVTIYINNLNEKIKLEELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSASNALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRQDDKGRKKKDQQDANQTGMGLNPAYAGAYGAAPPFSQMPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMVEAKPGIAFIEYGDEMQSTVAMQALQGFKITADNPMLITYAKK